PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.5G183200.5.p
Common NamePRUPE_ppa009757mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 251aa    MW: 26786.7 Da    PI: 6.3734
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.5G183200.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-10160207455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Prupe.5G183200.5.p 160 SHSLAERARREKISERMKLLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 207
                         8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.12E-9154211No hitNo description
SuperFamilySSF474597.07E-18154226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-18156225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.682156206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.7E-8160207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-10162212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MDPPLINESS FSAANPSAYS LAEIWPFSGE PGGSGGGLGL RMGSLGGLGD SSVNRDGSLE  60
ESTVTEQSGG GGGRKRRDVS SEDESSKLVS TSSASGLKDS SGKRMKLAGS QNENGGSKAE  120
VEESSAAGDN KPAEQSTKPS EPPKQDFIHV RARRGQATDS HSLAERARRE KISERMKLLQ  180
DLVPGCNKVI GKALVLDEII NYIQSLQHQV EFLSMKLEAV NSRMNLNPTI EAFPSKDVSL  240
VYFYYLHKSH *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.45053e-43fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6894210.0KP689421.1 Prunus pseudocerasus isolate Unigene13496 bHLH transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209455.11e-170hypothetical protein PRUPE_ppa009757mg
SwissprotQ9LV176e-83BH079_ARATH; Transcription factor bHLH79
TrEMBLM5WAA61e-170M5WAA6_PRUPE; Uncharacterized protein
STRINGVIT_17s0000g05370.t011e-112(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.12e-80bHLH family protein